The New Yorker did issue a response to his video that stated:

“Hasan Minhaj confirms in this video that he selectively presents information and embellishes to make a point: exactly what we reported. Our piece, which includes Minhaj’s perspective at length, was carefully reported and fact-checked. It is based on interviews with more than twenty people, including former Patriot Act and Daily Show staffers; members of Minhaj’s security team; and people who have been the subject of his stand-up work, including the former F.B.I. informant “Brother Eric” and the woman at the center of his prom-rejection story. We stand by our story.”

Source: https://www.buzzfeed.com/mychalthompson/hasan-minhaj-new-yorker-response-reactions